Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase tusa family protein | PviCFBP13507_05555 | Not Available | Positive | 1250934 - 1251185 | 9110.95 |
| ai-2e family transporter | PviCFBP13507_05560 | Not Available | Positive | 1251216 - 1252286 | 39504.2 |
| peroxiredoxin | PviCFBP13507_05565 | Not Available | Negative | 1252338 - 1252811 | 17379.6 |
| glycine cleavage system protein r | PviCFBP13507_05570 | Not Available | Negative | 1252821 - 1253384 | 20569.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PviCFBP13507_05575 | Not Available | Positive | 1253710 - 1254588 | 31218.8 |
| outer membrane protein assembly factor bamc | PviCFBP13507_05580 | Not Available | Positive | 1254607 - 1255725 | 40501.2 |
| mbl fold metallo-hydrolase | PviCFBP13507_05585 | Not Available | Positive | 1255726 - 1256484 | 27691.1 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | PviCFBP13507_05590 | Not Available | Positive | 1256513 - 1257223 | 26938.4 |
| Trna-ser | Not Available | Not Available | Positive | 1257316 - 1257405 | Not Available |
| mrna interferase mqsr | PviCFBP13507_05600 | Not Available | Positive | 1257647 - 1257949 | 11133.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
