Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | PviCFBP13507_05500 | Not Available | Negative | 1238081 - 1239286 | 43401.6 |
| catalase/peroxidase hpi | PviCFBP13507_05510 | Not Available | Negative | 1239727 - 1241997 | 82499.6 |
| hypothetical protein | PviCFBP13507_05515 | Not Available | Negative | 1242052 - 1242240 | 6647.17 |
| duf1460 domain-containing protein | PviCFBP13507_05520 | Not Available | Negative | 1242283 - 1243185 | 33463.0 |
| tautomerase family protein | PviCFBP13507_05525 | Not Available | Negative | 1243496 - 1243885 | 14381.4 |
| nitronate monooxygenase | PviCFBP13507_05530 | Not Available | Negative | 1243898 - 1244980 | 38533.2 |
| peptidase m20 | PviCFBP13507_05535 | Not Available | Negative | 1245297 - 1246586 | 46179.9 |
| lipase | PviCFBP13507_05540 | Not Available | Positive | 1246769 - 1247989 | 43043.2 |
| quinolinate synthase | PviCFBP13507_05545 | Not Available | Positive | 1248223 - 1249281 | 38728.5 |
| m48 family peptidase | PviCFBP13507_05550 | Not Available | Negative | 1249360 - 1250793 | 53313.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
