Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1227086 - 1227161 | Not Available |
| tigr03757 family integrating conjugative element protein | PviCFBP13507_05445 | Not Available | Negative | 1227750 - 1228130 | 13864.7 |
| lyse family translocator | PviCFBP13507_05450 | Not Available | Positive | 1228799 - 1229428 | 22231.8 |
| acyl carrier protein | PviCFBP13507_05460 | Not Available | Positive | 1231090 - 1231338 | 9563.15 |
| hypothetical protein | PviCFBP13507_05465 | Not Available | Positive | 1231351 - 1232751 | 51365.6 |
| hypothetical protein | PviCFBP13507_05470 | Not Available | Positive | 1232748 - 1233146 | 14701.5 |
| hypothetical protein | PviCFBP13507_05475 | Not Available | Positive | 1233149 - 1233718 | 20932.1 |
| hypothetical protein | PviCFBP13507_05480 | Not Available | Positive | 1233810 - 1234913 | 38021.6 |
| hypothetical protein | PviCFBP13507_05485 | Not Available | Positive | 1234913 - 1235515 | 21931.3 |
| enoyl-acp reductase | PviCFBP13507_05490 | Not Available | Positive | 1235512 - 1236297 | 27548.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
