Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 85500 - 85678 | Not Available |
| tonb-dependent receptor | PviCFBP13507_00385 | Not Available | Negative | 84131 - 86962 | 105605.0 |
| histidine phosphatase family protein | PviCFBP13507_00390 | Not Available | Positive | 87371 - 88009 | 22908.6 |
| pap2 family protein | PviCFBP13507_00395 | Not Available | Positive | 88006 - 88845 | 31918.0 |
| dna-binding response regulator | PviCFBP13507_00400 | Not Available | Positive | 88862 - 89578 | 27055.9 |
| arac family transcriptional regulator | PviCFBP13507_00405 | Not Available | Negative | 89565 - 90602 | 39311.0 |
| ggdef domain-containing protein | PviCFBP13507_00410 | Not Available | Negative | 90611 - 91525 | 34431.0 |
| tonb-dependent receptor | PviCFBP13507_00415 | Not Available | Positive | 91919 - 94435 | 92600.6 |
| 3-phytase | PviCFBP13507_00420 | Not Available | Positive | 94499 - 96421 | 69187.4 |
| protein tolq | PviCFBP13507_00425 | Not Available | Positive | 96509 - 97207 | 25458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
