Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | PviCFBP13507_05385 | Not Available | Positive | 1218945 - 1220003 | 39023.0 |
| tol-pal system-associated acyl-coa thioesterase | PviCFBP13507_05390 | Not Available | Positive | 1220139 - 1220606 | 17430.6 |
| protein tolq | PviCFBP13507_05395 | Not Available | Positive | 1220596 - 1221291 | 25333.4 |
| protein tolr | PviCFBP13507_05400 | Not Available | Positive | 1221306 - 1221770 | 16737.6 |
| cell envelope integrity protein tola | PviCFBP13507_05405 | Not Available | Positive | 1221770 - 1222840 | 38563.4 |
| tol-pal system protein tolb | PviCFBP13507_05410 | Not Available | Positive | 1222837 - 1224138 | 47649.7 |
| peptidoglycan-associated lipoprotein pal | PviCFBP13507_05415 | Not Available | Positive | 1224191 - 1224688 | 17677.8 |
| tol-pal system protein ybgf | PviCFBP13507_05420 | Not Available | Positive | 1224695 - 1225510 | 28768.8 |
| 7-carboxy-7-deazaguanine synthase quee | PviCFBP13507_05425 | Not Available | Positive | 1225684 - 1226331 | 24194.8 |
| 7-cyano-7-deazaguanine synthase quec | PviCFBP13507_05430 | Not Available | Positive | 1226333 - 1227022 | 24203.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
