Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | PviCFBP13507_05030 | Not Available | Negative | 1145600 - 1146382 | 28672.6 |
| 30s ribosomal protein s2 | PviCFBP13507_05035 | Not Available | Positive | 1146695 - 1147438 | 27222.1 |
| elongation factor ts | PviCFBP13507_05040 | Not Available | Positive | 1147629 - 1148498 | 30741.0 |
| ump kinase | PviCFBP13507_05045 | Not Available | Positive | 1148705 - 1149448 | 26603.6 |
| ribosome recycling factor | PviCFBP13507_05050 | Not Available | Positive | 1149445 - 1150002 | 20123.2 |
| di-trans,poly-cis-decaprenylcistransferase | PviCFBP13507_05055 | Not Available | Positive | 1150019 - 1150774 | 28114.5 |
| phosphatidate cytidylyltransferase | PviCFBP13507_05060 | Not Available | Positive | 1150774 - 1151589 | 29062.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | PviCFBP13507_05065 | Not Available | Positive | 1151586 - 1152776 | 42454.5 |
| zinc metallopeptidase rsep | PviCFBP13507_05070 | Not Available | Positive | 1152882 - 1154234 | 48401.1 |
| outer membrane protein assembly factor bama | PviCFBP13507_05075 | Not Available | Positive | 1154309 - 1156681 | 86905.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
