Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extensin | PviCFBP13507_04930 | Not Available | Positive | 1122625 - 1123314 | 25477.6 |
| energy transducer tonb | PviCFBP13507_04935 | Not Available | Negative | 1123315 - 1123935 | 22735.9 |
| sam-dependent methyltransferase | PviCFBP13507_04940 | Not Available | Positive | 1124032 - 1124826 | 28506.4 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_04945 | Not Available | Negative | 1124845 - 1125483 | 23361.1 |
| efflux rnd transporter periplasmic adaptor subunit | PviCFBP13507_04950 | Not Available | Positive | 1125575 - 1126675 | 40085.0 |
| multidrug transporter acrb | PviCFBP13507_04955 | Not Available | Positive | 1126681 - 1129749 | 113117.0 |
| duf4197 domain-containing protein | PviCFBP13507_04960 | Not Available | Negative | 1129925 - 1130614 | 23885.9 |
| glycerol-3-phosphate 1-o-acyltransferase | PviCFBP13507_04965 | Not Available | Negative | 1130846 - 1133347 | 94786.2 |
| hypothetical protein | PviCFBP13507_04970 | Not Available | Negative | 1133683 - 1134060 | 14155.4 |
| methyltransferase domain-containing protein | PviCFBP13507_04975 | Not Available | Negative | 1134081 - 1134890 | 30148.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
