Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | PviCFBP13507_00335 | Not Available | Positive | 70848 - 71582 | 26906.3 |
| porin | PviCFBP13507_00340 | Not Available | Negative | 71849 - 72571 | 28275.9 |
| abc transporter atp-binding protein | PviCFBP13507_00345 | Not Available | Negative | 72699 - 73463 | 28159.7 |
| peptide abc transporter atp-binding protein | PviCFBP13507_00350 | Not Available | Negative | 73474 - 74313 | 31293.3 |
| abc transporter permease | PviCFBP13507_00355 | Not Available | Negative | 74334 - 75239 | 32160.0 |
| abc transporter permease | PviCFBP13507_00360 | Not Available | Negative | 75239 - 76276 | 37606.5 |
| abc transporter substrate-binding protein | PviCFBP13507_00365 | Not Available | Negative | 76318 - 77940 | 60115.3 |
| enolase | PviCFBP13507_00370 | Not Available | Negative | 78034 - 79200 | 42930.2 |
| abc transporter atp-binding protein | PviCFBP13507_00375 | Not Available | Negative | 79582 - 81267 | 63297.8 |
| insulinase family protein | PviCFBP13507_00380 | Not Available | Negative | 81264 - 84080 | 105635.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
