Clavibacter michiganensis subsp. insidiosus str. R1-1

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter michiganensis subsp. insidiosus str. R1-1 is a Gram-positive, rod-shaped bacterium that typically arranges itself in pairs or as single cells. This microbe exhibits an aerobic metabolism, requiring oxygen for its growth and survival. Optimal growth conditions for strain R1-1 are observed at a temperature of 25.0°C, suggesting a preference for moderate environmental temperatures. The habitat of C. michiganensis subsp. insidiosus str. R1-1 is noted to be diverse, indicating its adaptability to various ecological niches. This adaptability may play a significant role in its interactions within microbial communities and its potential influence on plant health or soil ecosystems. Understanding the ecological roles of this bacterium could provide insights into its contributions to nutrient cycling or its interactions with other microbial species in its habitat. Further investigation into its specific ecological functions is warranted to elucidate its potential impacts on the environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
Strainsubsp. insidiosus R1-1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter michiganensis subsp. insidiosus str. R1-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Medicago sativa
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid

Gene Summary

Adenine Count

7938 bp

Thymine Count

7426 bp

Guanine Count

15813 bp

Cytosine Count

16513 bp

Genome Length

47690 bp

Protein-coding Genes

48 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factorVO01_RS02155Not AvailableNegative445590 - 44614420652.5
asp23/gls24 family envelope stress response proteinVO01_RS02160Not AvailablePositive446277 - 44674115402.1
30s ribosomal protein s6VO01_RS17690Not AvailablePositive446971 - 44726710348.5
nad-binding proteinVO01_RS17695Not AvailablePositive447392 - 44781113768.3
orotate phosphoribosyltransferaseVO01_RS02170Not AvailablePositive447878 - 44843219536.4
septum formation family proteinVO01_RS02175Not AvailablePositive448432 - 45050468843.7
mfs transporterVO01_RS02180Not AvailablePositive450622 - 45188742021.0
30s ribosomal protein s6VO01_RS02185Not AvailableNegative451888 - 45223211973.4
hypothetical proteinVO01_RS17005Not AvailablePositive452464 - 45288314428.9
duf2599 domain-containing proteinVO01_RS16585Not AvailablePositive452971 - 45397534708.0

Displaying genes 551 – 560 of 3331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.