Clavibacter sepedonicus

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter sepedonicus is a Gram-positive, rod-shaped bacterium that typically exhibits a cell arrangement consisting of pairs and singles. This microbe thrives optimally at a temperature of 25.0°C and is classified as an aerobe, requiring oxygen for growth. The habitat of Clavibacter sepedonicus is diverse, indicating its adaptability to various environmental conditions. Its rod morphology and aerobic nature suggest that it may play a role in specific ecological niches where oxygen is readily available, allowing for unique interactions with other microorganisms and potential host organisms. Understanding the growth conditions and structural characteristics of Clavibacter sepedonicus can contribute to insights into its ecological roles, particularly in terrestrial environments where oxygen levels fluctuate. Its ability to thrive in varied habitats may also inform studies on microbial diversity and resilience in changing ecological landscapes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter sepedonicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter sepedonicus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Vicia faba, Solanum tuberosum, Solanum lycopersicum
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter sepedonicus plasmid pCSL1, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinCMS_RS15635P33116Negative10137 - 1191563612.4
thiopeptide-type bacteriocin biosynthesis proteinCMS_RS18400Not AvailableNegative11908 - 1263926344.1
lantibiotic dehydrataseCMS_RS15640Not AvailableNegative12543 - 1505091490.5
lanthionine synthetase c family proteinCMS_RS15645Not AvailableNegative15043 - 1634144830.0
fdld family class i lanthipeptideCMS_RS17410Not AvailableNegative16404 - 165806015.12
hypothetical proteinCMS_RS15650Not AvailableNegative16889 - 1736215804.6
hypothetical proteinCMS_RS15655Not AvailablePositive17761 - 1809312553.0
hypothetical proteinCMS_RS17415Not AvailableNegative18090 - 182696559.77
nyn domain-containing proteinCMS_RS17420Not AvailablePositive18465 - 1905221990.0
hypothetical proteinCMS_RS15670Not AvailableNegative19083 - 1957717948.5

Displaying genes 11 – 20 of 3308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

Health ConditionRelationReference
Ring rot of potatoCausesPMC11595182
Ring rotCausesPMC11595182
Bacterial ring rot of potatoCausesPMC7009210
Bacterial ring rotCausesPMC7009210
Bacterial ring rot of potatoCausesPMC9190974
Potato ring rotCausesPMC9190974
Bacterial ring rotCausesPMC9190974
Severe wiltCausesPMC9190974
Ring rotCausesPMC9190974
Bacterial ring rot diseaseCausesPMC9190974

Displaying health effects 1 – 10 of 13 in total