Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylaconitate cis-trans isomerase prpf | FHI69_04525 | Not Available | Negative | 1006032 - 1007222 | 40849.1 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | FHI69_04530 | Not Available | Negative | 1007337 - 1009931 | 93935.4 |
| 2-methylcitrate synthase | FHI69_04535 | Not Available | Negative | 1009943 - 1011097 | 42081.2 |
| methylisocitrate lyase | FHI69_04540 | Not Available | Negative | 1011167 - 1012054 | 31749.1 |
| hypothetical protein | FHI69_04545 | Not Available | Negative | 1012423 - 1012671 | 8924.47 |
| hypothetical protein | FHI69_04550 | Not Available | Negative | 1012795 - 1013031 | 8779.12 |
| mbl fold metallo-hydrolase | FHI69_04555 | Not Available | Positive | 1013207 - 1014064 | 31166.9 |
| serine o-acetyltransferase | FHI69_04560 | Not Available | Positive | 1014459 - 1015208 | 26294.2 |
| mfs transporter | FHI69_04565 | Not Available | Positive | 1015330 - 1016793 | 49464.5 |
| efflux rnd transporter periplasmic adaptor subunit | FHI69_04570 | Not Available | Positive | 1016790 - 1017932 | 39977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
