Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FHI69_04220 | Not Available | Negative | 928645 - 929139 | 17930.9 |
| laci family dna-binding transcriptional regulator | FHI69_04225 | Not Available | Negative | 929361 - 930395 | 37674.1 |
| dihydroxy-acid dehydratase | FHI69_04230 | Not Available | Positive | 930722 - 932458 | 62401.8 |
| 2-dehydro-3-deoxyglucarate aldolase | FHI69_04235 | Not Available | Positive | 932503 - 933315 | 28570.5 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | FHI69_04240 | Not Available | Positive | 933380 - 934483 | 39719.4 |
| abc transporter substrate-binding protein | FHI69_04245 | Not Available | Positive | 934532 - 935782 | 45212.5 |
| sugar abc transporter permease | FHI69_04250 | Not Available | Positive | 935859 - 936773 | 33961.2 |
| carbohydrate abc transporter permease | FHI69_04255 | Not Available | Positive | 936770 - 937600 | 30254.0 |
| aldose 1-epimerase | FHI69_04260 | Not Available | Positive | 937609 - 938496 | 31765.3 |
| smp-30/gluconolactonase/lre family protein | FHI69_04265 | Not Available | Positive | 938489 - 939397 | 33192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
