Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid protein | FHI69_09510 | Not Available | Negative | 2093689 - 2094705 | 37510.6 |
| Capsid scaffolding protein | FHI69_09515 | Not Available | Negative | 2094754 - 2095545 | 28200.0 |
| Gp4, phage terminase, atpase subunit | FHI69_09520 | Not Available | Positive | 2095682 - 2097493 | 68870.4 |
| Portal vertex protein | FHI69_09525 | Not Available | Positive | 2097490 - 2098551 | 39162.3 |
| Hypothetical protein | FHI69_09530 | Not Available | Positive | 2098548 - 2098763 | 7684.07 |
| Attr | Not Available | Not Available | Positive | 2100574 - 2100604 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 231 - 343 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 585 - 2124 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 652 - 3410 | Not Available |
| is110 family transposase | FHI69_00005 | Not Available | Negative | 108 - 1067 | 35528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
