Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | FHI69_03720 | Not Available | Positive | 813913 - 814608 | 24754.4 |
| lysine--trna ligase | FHI69_03725 | Not Available | Positive | 814627 - 816156 | 57220.6 |
| gfo/idh/moca family oxidoreductase | FHI69_03730 | Not Available | Negative | 816228 - 817229 | 35440.4 |
| porin | FHI69_03735 | Not Available | Negative | 817241 - 818263 | 34779.1 |
| d-glycerate dehydrogenase | FHI69_03740 | Not Available | Negative | 818260 - 819249 | 35586.3 |
| sugar kinase | FHI69_03745 | Not Available | Negative | 819270 - 820217 | 33029.5 |
| tim barrel protein | FHI69_03750 | Not Available | Negative | 820214 - 820960 | 26607.9 |
| amino acid abc transporter atp-binding protein | FHI69_03755 | Not Available | Negative | 820957 - 821691 | 26798.7 |
| amino acid abc transporter permease | FHI69_03760 | Not Available | Negative | 821678 - 822328 | 24126.9 |
| amino acid abc transporter permease | FHI69_03765 | Not Available | Negative | 822330 - 823022 | 25175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
