Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm sorting domain-containing protein | FHI69_03620 | Not Available | Negative | 789832 - 790503 | 23127.2 |
| hypothetical protein | FHI69_03625 | Not Available | Negative | 790619 - 794140 | 122415.0 |
| hypothetical protein | FHI69_03630 | Not Available | Positive | 794517 - 795581 | 38512.9 |
| single-stranded-dna-specific exonuclease recj | FHI69_03635 | Not Available | Positive | 795578 - 797278 | 61883.5 |
| fosfomycin resistance glutathione transferase | FHI69_03640 | Not Available | Positive | 797477 - 797893 | 15244.0 |
| duf2384 domain-containing protein | FHI69_03645 | Not Available | Positive | 797974 - 798411 | 16321.9 |
| res domain-containing protein | FHI69_03650 | Not Available | Positive | 798414 - 799121 | 25820.5 |
| duf2288 domain-containing protein | FHI69_03655 | Not Available | Positive | 799163 - 799483 | 11936.1 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | FHI69_03660 | Not Available | Positive | 799591 - 799863 | 9999.0 |
| type ii toxin-antitoxin system rele/pare family toxin | FHI69_03665 | Not Available | Positive | 799872 - 800195 | 12492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
