Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp27, phage tail protein, p2 gpe family | FHI69_09410 | Not Available | Negative | 2080168 - 2080281 | 4252.98 |
| Tail assembly protein | FHI69_09415 | Not Available | Negative | 2080290 - 2080598 | 10715.0 |
| Tail core protein | FHI69_09420 | Not Available | Negative | 2080637 - 2081146 | 18343.0 |
| Tail sheath protein | FHI69_09425 | Not Available | Negative | 2081205 - 2082380 | 42284.1 |
| hypothetical protein | FHI69_09430 | Not Available | Negative | 2082411 - 2082917 | 17390.7 |
| Tail fiber protein | FHI69_09435 | Not Available | Negative | 2082919 - 2084133 | 41856.2 |
| Tail protein i | FHI69_09440 | Not Available | Negative | 2084130 - 2084729 | 22148.8 |
| Baseplate assembly protein | FHI69_09445 | Not Available | Negative | 2084743 - 2085654 | 31914.0 |
| Baseplate assembly protein | FHI69_09450 | Not Available | Negative | 2085651 - 2085995 | 12311.9 |
| Gp39, phage baseplate assembly protein | FHI69_09455 | Not Available | Negative | 2085992 - 2086654 | 22292.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
