Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbl | FHI69_02650 | Not Available | Positive | 595769 - 597415 | 54477.3 |
| conjugal transfer protein trbn | FHI69_02655 | Not Available | Positive | 597451 - 597888 | 16769.2 |
| 2-keto-d-gluconate dehydrogenase | FHI69_02660 | Not Available | Negative | 598252 - 599595 | 50285.0 |
| restriction endonuclease | FHI69_02665 | Not Available | Negative | 599616 - 601526 | 71969.4 |
| hypothetical protein | FHI69_02675 | Not Available | Negative | 603227 - 603796 | 21492.3 |
| hypothetical protein | FHI69_02680 | Not Available | Negative | 604014 - 604421 | 15142.0 |
| duf1738 domain-containing protein | FHI69_02685 | Not Available | Negative | 604498 - 607740 | 116376.0 |
| protein trad | FHI69_02690 | Not Available | Negative | 607712 - 607984 | 9206.42 |
| conjugative transfer signal peptidase traf | FHI69_02695 | Not Available | Negative | 608023 - 608559 | 19129.4 |
| conjugal transfer protein trag | FHI69_02700 | Not Available | Negative | 608556 - 610466 | 69571.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
