Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | FHI69_02245 | Not Available | Negative | 493261 - 494871 | 58836.4 |
| hypothetical protein | FHI69_02250 | Not Available | Negative | 494881 - 495351 | 16012.5 |
| porin | FHI69_02255 | Not Available | Negative | 495434 - 496600 | 40291.7 |
| homoprotocatechuate degradation operon regulator hpar | FHI69_02260 | Not Available | Negative | 496915 - 497343 | 16184.0 |
| duf885 domain-containing protein | FHI69_02265 | Not Available | Negative | 497473 - 499218 | 64106.1 |
| substrate-binding domain-containing protein | FHI69_02270 | Not Available | Negative | 499348 - 500397 | 37328.4 |
| phytanoyl-coa dioxygenase | FHI69_02275 | Not Available | Positive | 500502 - 501689 | 43003.8 |
| gfo/idh/moca family oxidoreductase | FHI69_02280 | Not Available | Positive | 501722 - 502840 | 39983.6 |
| glycoside hydrolase family 3 protein | FHI69_02285 | Not Available | Negative | 502848 - 504854 | 72376.9 |
| arac family transcriptional regulator | FHI69_02290 | Not Available | Positive | 504988 - 506109 | 41649.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
