Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | FHI69_01895 | Not Available | Positive | 410544 - 411053 | 18819.8 |
| duf4880 domain-containing protein | FHI69_01900 | Not Available | Positive | 411050 - 412036 | 35263.8 |
| tonb-dependent siderophore receptor | FHI69_01905 | Not Available | Positive | 412129 - 414597 | 89114.8 |
| pepsy domain-containing protein | FHI69_01910 | Not Available | Positive | 414612 - 415811 | 43860.6 |
| rna 2'-phosphotransferase | FHI69_01915 | Not Available | Negative | 415816 - 416361 | 19273.2 |
| tonb-dependent receptor | FHI69_01920 | Not Available | Negative | 416379 - 418457 | 76105.3 |
| response regulator | FHI69_01925 | Not Available | Positive | 418568 - 419791 | 43618.2 |
| hypothetical protein | FHI69_01930 | Not Available | Negative | 419776 - 420156 | 13333.7 |
| tetratricopeptide repeat protein | FHI69_01935 | Not Available | Negative | 420157 - 422850 | 96655.9 |
| nitrate abc transporter substrate-binding protein | FHI69_01940 | Not Available | Negative | 423153 - 424241 | 39865.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
