Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide mxkdx repeat protein | FHI69_01845 | Not Available | Negative | 401887 - 402174 | 10241.8 |
| molybdopterin-binding protein | FHI69_01850 | Not Available | Negative | 402258 - 403034 | 29101.9 |
| duf4405 domain-containing protein | FHI69_01855 | Not Available | Negative | 403039 - 403635 | 22214.2 |
| duf1223 domain-containing protein | FHI69_01860 | Not Available | Negative | 403635 - 404441 | 28508.3 |
| sigma-70 family rna polymerase sigma factor | FHI69_01865 | Not Available | Positive | 404573 - 405157 | 21954.2 |
| duf1109 domain-containing protein | FHI69_01870 | Not Available | Positive | 405154 - 405801 | 22649.7 |
| duf4331 domain-containing protein | FHI69_01875 | Not Available | Positive | 406177 - 407676 | 52254.9 |
| hypothetical protein | FHI69_01880 | Not Available | Positive | 407690 - 407938 | 8072.61 |
| hypothetical protein | FHI69_01885 | Not Available | Positive | 408005 - 409216 | 43768.8 |
| hupe/urej family protein | FHI69_01890 | Not Available | Positive | 409213 - 410415 | 43270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
