Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | FHI69_01195 | Not Available | Negative | 270029 - 271378 | 48867.9 |
| surf1 family protein | FHI69_01200 | Not Available | Negative | 271362 - 272189 | 29825.6 |
| cytochrome o ubiquinol oxidase subunit iv | FHI69_01205 | Not Available | Negative | 272186 - 272572 | 14379.8 |
| cytochrome o ubiquinol oxidase subunit iii | FHI69_01210 | Not Available | Negative | 272569 - 273207 | 23483.0 |
| cytochrome o ubiquinol oxidase subunit i | FHI69_01215 | Not Available | Negative | 273200 - 275203 | 75159.3 |
| ubiquinol oxidase subunit ii | FHI69_01220 | Not Available | Negative | 275288 - 276271 | 35925.0 |
| mhs family mfs transporter | FHI69_01225 | Not Available | Positive | 276489 - 277835 | 48234.9 |
| hsp20/alpha crystallin family protein | FHI69_01230 | Not Available | Negative | 278202 - 278654 | 16897.8 |
| response regulator | FHI69_01235 | Not Available | Positive | 278937 - 282419 | 128836.0 |
| protein-glutamate o-methyltransferase cher | FHI69_01240 | Not Available | Positive | 282419 - 283300 | 33123.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
