Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | FHI69_00105 | Not Available | Negative | 22605 - 23351 | 26038.6 |
| vwa domain-containing protein | FHI69_00110 | Not Available | Positive | 23617 - 24300 | 24528.2 |
| protein phosphatase 2c domain-containing protein | FHI69_00115 | Not Available | Positive | 24304 - 25071 | 26789.8 |
| hypothetical protein | FHI69_00120 | Not Available | Positive | 25068 - 27413 | 84387.8 |
| toxin-antitoxin system ywqk family antitoxin | FHI69_00125 | Not Available | Positive | 27423 - 28772 | 49347.4 |
| hypothetical protein | FHI69_00130 | Not Available | Positive | 28754 - 29332 | 21018.4 |
| l-aspartate oxidase | FHI69_00135 | Not Available | Negative | 29454 - 31067 | 59141.5 |
| tigr03013 family pep-cterm/xrta system glycosyltransferase | FHI69_00140 | Not Available | Positive | 31273 - 32661 | 50939.0 |
| pep-cterm system histidine kinase prsk | FHI69_00145 | Not Available | Positive | 32658 - 34760 | 76949.5 |
| pep-cterm-box response regulator transcription factor | FHI69_00150 | Not Available | Positive | 34776 - 36146 | 49822.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
