Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Janthinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Janthinobacterium |
| Species | Janthinobacterium lividum |
| Strain | UCD_MED1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oncorhynchus mykiss, Groenlandia densa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188835 bp
Thymine Count
1181209 bp
Guanine Count
1999900 bp
Cytosine Count
2012680 bp
Genome Length
6382737 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | FHI69_04875 | Not Available | Negative | 1091308 - 1091505 | 7385.3 |
| translation initiation factor if-3 | FHI69_04880 | Not Available | Negative | 1091733 - 1092254 | 19847.3 |
| threonine--trna ligase | FHI69_04885 | Not Available | Negative | 1092306 - 1094213 | 71773.6 |
| Trna-val | Not Available | Not Available | Positive | 1094427 - 1094503 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1094567 - 1094643 | Not Available |
| hypothetical protein | FHI69_04900 | Not Available | Positive | 1094780 - 1095244 | 17290.8 |
| acyltransferase | FHI69_04905 | Not Available | Negative | 1095246 - 1096313 | 39747.8 |
| succinylglutamate desuccinylase | FHI69_04910 | Not Available | Positive | 1096497 - 1097459 | 34985.4 |
| qace family quaternary ammonium compound efflux smr transporter | FHI69_04915 | Not Available | Negative | 1097621 - 1097950 | 11707.7 |
| quaternary ammonium compound efflux smr transporter suge | FHI69_04920 | Not Available | Negative | 1097974 - 1098294 | 10823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
