Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio splendidus |
| Strain | DSM 19640 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Bivalvia, Holothuroidea, Ostreidae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1603236 bp
Thymine Count
1608654 bp
Guanine Count
1263533 bp
Cytosine Count
1253303 bp
Genome Length
5728726 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
167 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | VSPL_08580 | Not Available | Negative | 960578 - 963268 | 97518.5 |
| hypothetical protein | VSPL_08590 | Not Available | Negative | 963291 - 964778 | 54908.0 |
| ribosome maturation factor rimp | VSPL_08600 | Not Available | Negative | 964814 - 965269 | 16730.9 |
| Trna-met | Not Available | Not Available | Positive | 965507 - 965583 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 965637 - 965721 | Not Available |
| protein-export membrane protein secg | VSPL_08630 | Not Available | Negative | 965738 - 966070 | 11465.8 |
| phosphoglucosamine mutase | VSPL_08640 | Not Available | Negative | 966349 - 967689 | 47500.4 |
| dihydropteroate synthase | VSPL_08650 | Not Available | Negative | 967711 - 968541 | 30062.7 |
| atp-dependent zinc metalloprotease ftsh | VSPL_08660 | Not Available | Negative | 968633 - 970618 | 72969.5 |
| ribosomal rna large subunit methyltransferase e | VSPL_08670 | Not Available | Negative | 970717 - 971346 | 23395.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Fish pathogen | Causes | PMC12838003 |
| Skin ulceration syndrome | Causes | PMC9653642 |
| Sus | Causes | PMC9653642 |
