Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodoplanes |
| Species | Rhodoplanes roseus |
| Strain | DSM 5909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1053994 bp
Thymine Count
1054491 bp
Guanine Count
2383008 bp
Cytosine Count
2386923 bp
Genome Length
6879536 bp
Protein-coding Genes
6309 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter atp-binding protein | CH341_03690 | Not Available | Positive | 820693 - 821460 | 27624.6 |
| abc transporter atp-binding protein | CH341_03695 | Not Available | Positive | 821453 - 822193 | 26199.9 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | CH341_03700 | Not Available | Positive | 822250 - 823353 | 41451.3 |
| carnitine dehydratase | CH341_03705 | Not Available | Positive | 823499 - 824632 | 39991.1 |
| hypothetical protein | CH341_03710 | Not Available | Positive | 824539 - 825636 | 37895.1 |
| gnat family n-acetyltransferase | CH341_03715 | Not Available | Positive | 825842 - 826351 | 18823.4 |
| hypothetical protein | CH341_03720 | Not Available | Positive | 826580 - 827629 | 38322.5 |
| succinate dehydrogenase, cytochrome b556 subunit | CH341_03725 | Not Available | Positive | 827770 - 828180 | 15354.1 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | CH341_03730 | Not Available | Positive | 828177 - 828566 | 14051.9 |
| succinate dehydrogenase flavoprotein subunit | CH341_03735 | Not Available | Positive | 828570 - 830405 | 66328.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.