Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodoplanes |
| Species | Rhodoplanes roseus |
| Strain | DSM 5909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1053994 bp
Thymine Count
1054491 bp
Guanine Count
2383008 bp
Cytosine Count
2386923 bp
Genome Length
6879536 bp
Protein-coding Genes
6309 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | CH341_01530 | Not Available | Negative | 335992 - 337776 | 63322.3 |
| oxidoreductase | CH341_01535 | Not Available | Positive | 338227 - 339024 | 28214.9 |
| nif-specific transcriptional activator nifa | CH341_01540 | Not Available | Positive | 339304 - 341028 | 62038.0 |
| nitrogenase cofactor biosynthesis protein nifb | CH341_01545 | Not Available | Positive | 341417 - 342898 | 53620.4 |
| ferredoxin | CH341_01550 | Not Available | Positive | 342932 - 343126 | 6779.31 |
| lrv fes4 cluster domain-containing protein | CH341_01555 | Not Available | Positive | 343140 - 343940 | 29745.9 |
| nitrogen fixation protein nifz | CH341_01560 | Not Available | Positive | 343924 - 344241 | 11678.0 |
| putative nitrogen fixation protein nift | CH341_01565 | Not Available | Positive | 344238 - 344450 | 7928.76 |
| sir2 family protein | CH341_01570 | Not Available | Positive | 344447 - 345331 | 31475.6 |
| nitrogenase iron protein | CH341_01575 | Not Available | Positive | 345755 - 346654 | 32204.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.