Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodoplanes |
| Species | Rhodoplanes roseus |
| Strain | DSM 5909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1053994 bp
Thymine Count
1054491 bp
Guanine Count
2383008 bp
Cytosine Count
2386923 bp
Genome Length
6879536 bp
Protein-coding Genes
6309 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl pyrophosphate synthase | CH341_01475 | Not Available | Positive | 321428 - 322387 | 33542.1 |
| ferredoxin-nadp reductase | CH341_01480 | Not Available | Positive | 322739 - 323617 | 31606.4 |
| 2-oxoglutarate oxidoreductase | CH341_01490 | Not Available | Positive | 325223 - 327139 | 69269.5 |
| hypothetical protein | CH341_01495 | Not Available | Positive | 327153 - 328142 | 36601.9 |
| hypothetical protein | CH341_01500 | Not Available | Positive | 328179 - 330386 | 77525.1 |
| myristoyl transferase | CH341_01505 | Not Available | Positive | 330728 - 331726 | 35092.8 |
| abc transporter permease | CH341_01510 | Not Available | Positive | 331755 - 332546 | 28507.7 |
| abc transporter atp-binding protein | CH341_01515 | Not Available | Positive | 332543 - 333355 | 29884.6 |
| isochorismatase | CH341_01520 | Not Available | Positive | 333381 - 334367 | 35465.6 |
| alpha/beta hydrolase | CH341_01525 | Not Available | Negative | 334369 - 335892 | 53872.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.