Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodoplanes |
| Species | Rhodoplanes roseus |
| Strain | DSM 5909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1053994 bp
Thymine Count
1054491 bp
Guanine Count
2383008 bp
Cytosine Count
2386923 bp
Genome Length
6879536 bp
Protein-coding Genes
6309 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CH341_01425 | Not Available | Positive | 307188 - 308732 | 52098.0 |
| gtp-binding protein | CH341_01430 | Not Available | Positive | 308729 - 309922 | 43319.8 |
| hypothetical protein | CH341_01435 | Not Available | Positive | 309930 - 310502 | 20994.5 |
| hypothetical protein | CH341_01440 | Not Available | Positive | 310631 - 311278 | 22362.6 |
| hopanoid biosynthesis-associated rnd transporter hpnn | CH341_01445 | Not Available | Negative | 311388 - 314039 | 94461.9 |
| hopanoid biosynthesis associated radical sam protein hpnh | CH341_01450 | Not Available | Positive | 314623 - 315768 | 42527.6 |
| squalene--hopene cyclase | CH341_01455 | Not Available | Negative | 315907 - 317892 | 73570.0 |
| hypothetical protein | CH341_01460 | Not Available | Negative | 317928 - 319160 | 43706.2 |
| squalene synthase hpnd | CH341_01465 | Not Available | Negative | 319160 - 320008 | 31641.0 |
| squalene synthase hpnc | CH341_01470 | Not Available | Negative | 320005 - 320898 | 32775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
