Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodoplanes |
| Species | Rhodoplanes roseus |
| Strain | DSM 5909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1053994 bp
Thymine Count
1054491 bp
Guanine Count
2383008 bp
Cytosine Count
2386923 bp
Genome Length
6879536 bp
Protein-coding Genes
6309 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | CH341_00835 | Not Available | Negative | 173743 - 174804 | 38170.8 |
| branched-chain amino acid abc transporter permease | CH341_00840 | Not Available | Negative | 174801 - 175673 | 30596.8 |
| abc transporter substrate-binding protein | CH341_00845 | Not Available | Negative | 175860 - 177017 | 40733.3 |
| llm class f420-dependent oxidoreductase | CH341_00850 | Not Available | Negative | 177169 - 178137 | 36337.8 |
| 3-oxoadipate--succinyl-coa transferase subunit b | CH341_00855 | Not Available | Negative | 178250 - 179032 | 28370.4 |
| coa synthetase | CH341_00860 | Not Available | Negative | 179025 - 179993 | 35672.2 |
| hypothetical protein | CH341_00865 | Not Available | Negative | 180097 - 180870 | 27753.7 |
| allophanate hydrolase | CH341_00870 | Not Available | Positive | 181043 - 181798 | 26511.9 |
| hypothetical protein | CH341_00875 | Not Available | Positive | 181795 - 182883 | 36689.1 |
| gntr family transcriptional regulator | CH341_00880 | Not Available | Positive | 182901 - 183695 | 28753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.