Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 828021 - 828035 | Not Available |
| Integrase | C5E11_03775 | Not Available | Positive | 828290 - 829204 | 33467.2 |
| hypothetical protein | C5E11_03780 | Not Available | Positive | 829280 - 829633 | 13465.3 |
| hypothetical protein | C5E11_03785 | Not Available | Negative | 830038 - 830508 | 18331.9 |
| Hypothetical protein | C5E11_03790 | Not Available | Positive | 830521 - 831372 | 30463.3 |
| O-polysaccharide acetyltransferase protein | C5E11_03795 | Not Available | Negative | 831380 - 832477 | 39720.6 |
| Putative structural protein | C5E11_03800 | Not Available | Negative | 832677 - 834542 | 64744.5 |
| hypothetical protein | C5E11_03805 | Not Available | Negative | 834563 - 835201 | 22683.5 |
| Minor tail protein | C5E11_03810 | Not Available | Negative | 835203 - 836342 | 41125.4 |
| Membrane protein | C5E11_03815 | Not Available | Negative | 836458 - 836844 | 12904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
