Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosysynthesis protein | C5E11_00210 | Not Available | Positive | 46876 - 47445 | 20489.4 |
| l-serine ammonia-lyase | C5E11_00215 | Not Available | Negative | 47450 - 48883 | 49579.4 |
| mfs transporter | C5E11_00220 | Not Available | Positive | 49163 - 50554 | 50702.0 |
| hypothetical protein | C5E11_00225 | Not Available | Negative | 50730 - 51617 | 33153.9 |
| oxidoreductase | C5E11_00230 | Not Available | Negative | 51945 - 52691 | 26364.6 |
| transcriptional regulator | C5E11_00235 | Not Available | Positive | 52792 - 53628 | 30948.7 |
| hypothetical protein | C5E11_00240 | Not Available | Negative | 53917 - 55488 | 57091.3 |
| hypothetical protein | C5E11_00245 | Not Available | Positive | 55609 - 56943 | 50850.3 |
| hypothetical protein | C5E11_00250 | Not Available | Positive | 56940 - 57788 | 30855.8 |
| putative sulfate exporter family transporter | C5E11_00255 | Not Available | Negative | 58170 - 59195 | 34681.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
