Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5E11_00160 | Not Available | Negative | 35737 - 36600 | 29253.4 |
| cystathionine beta-synthase | C5E11_00165 | Not Available | Positive | 36738 - 37784 | 36418.7 |
| dibenzothiophene desulfurization enzyme | C5E11_00170 | Not Available | Positive | 37815 - 39116 | 47185.6 |
| phenylalanine ammonia-lyase | C5E11_00175 | Not Available | Positive | 39116 - 40540 | 49356.7 |
| 2,5-diketo-d-gluconic acid reductase | C5E11_00180 | Not Available | Positive | 40537 - 41373 | 31134.4 |
| thioredoxin domain-containing protein | C5E11_00185 | Not Available | Positive | 41385 - 43241 | 65676.8 |
| galactokinase | C5E11_00190 | Not Available | Negative | 43215 - 44381 | 40908.9 |
| galactose-1-phosphate uridylyltransferase | C5E11_00195 | Not Available | Negative | 44378 - 45499 | 41220.7 |
| deor/glpr transcriptional regulator | C5E11_00200 | Not Available | Positive | 45623 - 46468 | 29272.3 |
| hypothetical protein | C5E11_00205 | Not Available | Negative | 46370 - 46744 | 13714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
