Clavibacter michiganensis

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter michiganensis is a Gram-positive, rod-shaped bacterium that typically occurs in pairs or as single cells. This organism thrives optimally at a temperature of 25.0°C and is classified as an aerobe, indicating its requirement for oxygen in metabolic processes. Isolated from multiple habitats, C. michiganensis demonstrates a versatile ecological niche, suggesting its adaptability to various environmental conditions. The rod shape and specific cell arrangement of Clavibacter michiganensis contribute to its identification and classification within microbiological studies. Its Gram-positive nature implies the presence of a thick peptidoglycan layer in the cell wall, a characteristic that can influence its interactions with other microorganisms and its susceptibility to certain antibiotics. Given its ability to thrive in various habitats, Clavibacter michiganensis represents a microbial entity capable of playing diverse roles within ecosystems, potentially influencing nutrient cycling or participating in symbiotic relationships. Such versatility underscores the importance of further research to elucidate its ecological functions and interactions within microbial communities. Understanding these dynamics may reveal insights into the overall health and stability of the environments it inhabits.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter michiganensis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Triticum aestivum, Solanum tuberosum, Solanum lycopersicum
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
Pathogenicityeggplant

Genome Summary

Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome

Gene Summary

Adenine Count

624236 bp

Thymine Count

620791 bp

Guanine Count

1225686 bp

Cytosine Count

1223693 bp

Genome Length

3694510 bp

Protein-coding Genes

3478 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-glucosidaseC5E11_00110Not AvailablePositive23194 - 2436643430.4
pyridoxamine 5'-phosphate oxidaseC5E11_00115Not AvailableNegative24381 - 2503423981.8
mfs transporterC5E11_00120Not AvailableNegative25037 - 2624841711.3
atp-dependent rna helicase hrpaC5E11_00125Not AvailableNegative26261 - 30091142640.0
gnat family n-acetyltransferaseC5E11_00130Not AvailablePositive30225 - 3074018134.4
polyketide cyclaseC5E11_00135Not AvailableNegative30715 - 3112815059.5
hnh endonucleaseC5E11_00140Not AvailableNegative31347 - 3268147521.3
laci family transcriptional regulatorC5E11_00145Not AvailableNegative32934 - 3392634424.6
mfs transporterC5E11_00150Not AvailablePositive33948 - 3517741054.8
gamma carbonic anhydrase family proteinC5E11_00155Not AvailableNegative35138 - 3573420365.2

Displaying genes 61 – 70 of 6664 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Goss s wiltCausesPMC6622472
Bacterial wiltCausesPMC9190982
CankerCausesPMC9190982
Bacterial wilt and canker of tomatoCausesPMC9190982
Potato ring rotCausesPMC9190982
Gross's wilt of maizeCausesPMC9190982
Bacterial canker of pepperCausesPMC9190982
Bacterial wilt of alfalfaCausesPMC9190982
Bacterial mosaic of wheatCausesPMC9190982
Bean leaf yellowingCausesPMC9190982

Displaying health effects 1 – 10 of 15 in total