Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4349 domain-containing protein | C5E11_00060 | Not Available | Negative | 11598 - 12440 | 29006.1 |
| aldo/keto reductase | C5E11_00065 | Not Available | Positive | 12547 - 13530 | 34708.2 |
| hypothetical protein | C5E11_00070 | Not Available | Positive | 13629 - 14939 | 44322.9 |
| oxidoreductase | C5E11_00075 | Not Available | Negative | 14943 - 15767 | 30390.4 |
| laci family transcriptional regulator | C5E11_00080 | Not Available | Positive | 15840 - 16904 | 37840.1 |
| peptide abc transporter substrate-binding protein | C5E11_00085 | Not Available | Positive | 17038 - 18690 | 60316.8 |
| abc transporter permease | C5E11_00090 | Not Available | Positive | 18683 - 19744 | 37355.8 |
| abc transporter permease | C5E11_00095 | Not Available | Positive | 19741 - 20679 | 32978.8 |
| abc transporter atp-binding protein | C5E11_00100 | Not Available | Positive | 20676 - 22346 | 60385.6 |
| alpha/beta hydrolase | C5E11_00105 | Not Available | Positive | 22343 - 23194 | 30287.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
