Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major tail protein | C5E11_03870 | Not Available | Negative | 844361 - 844927 | 19980.5 |
| Hypothetical protein | C5E11_03875 | Not Available | Negative | 844988 - 845419 | 15411.4 |
| Hypothetical protein | C5E11_03880 | Not Available | Negative | 845412 - 845684 | 9364.05 |
| Hypothetical protein | C5E11_03885 | Not Available | Negative | 845684 - 846031 | 12642.6 |
| hypothetical protein | C5E11_03890 | Not Available | Negative | 846031 - 846237 | 7442.78 |
| Hypothetical protein | C5E11_03895 | Not Available | Negative | 846296 - 846649 | 12538.9 |
| hypothetical protein | C5E11_03900 | Not Available | Negative | 846668 - 847114 | 16053.0 |
| Major capsid protein | C5E11_03905 | Not Available | Negative | 847114 - 848037 | 32622.1 |
| Hypothetical protein | C5E11_03910 | Not Available | Negative | 848079 - 848438 | 11588.0 |
| Capsid maturation protease | C5E11_03915 | Not Available | Negative | 848441 - 849772 | 46373.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
