Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Triticum aestivum, Solanum tuberosum, Solanum lycopersicum |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis strain AY2B8 AY2B8_33, whole genome
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C5E11_03820 | Not Available | Negative | 836849 - 837202 | 12972.2 |
| hypothetical protein | C5E11_03825 | Not Available | Negative | 837199 - 837408 | 8021.45 |
| hypothetical protein | C5E11_03830 | Not Available | Negative | 837405 - 837737 | 11990.2 |
| hypothetical protein | C5E11_03835 | Not Available | Negative | 837765 - 838643 | 31196.7 |
| hypothetical protein | C5E11_03840 | Not Available | Negative | 838640 - 838846 | 7360.84 |
| Minor tail protein | C5E11_03845 | Not Available | Negative | 838904 - 839887 | 33924.3 |
| Minor tail protein | C5E11_03850 | Not Available | Negative | 839896 - 840729 | 30457.9 |
| Tape measure protein | C5E11_03855 | Not Available | Negative | 840729 - 843542 | 95004.3 |
| hypothetical protein | C5E11_03860 | Not Available | Negative | 843539 - 843739 | 7254.57 |
| hypothetical protein | C5E11_03865 | Not Available | Negative | 843874 - 844269 | 14582.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Goss s wilt | Causes | PMC6622472 |
| Bacterial wilt | Causes | PMC9190982 |
| Canker | Causes | PMC9190982 |
| Bacterial wilt and canker of tomato | Causes | PMC9190982 |
| Potato ring rot | Causes | PMC9190982 |
| Gross's wilt of maize | Causes | PMC9190982 |
| Bacterial canker of pepper | Causes | PMC9190982 |
| Bacterial wilt of alfalfa | Causes | PMC9190982 |
| Bacterial mosaic of wheat | Causes | PMC9190982 |
| Bean leaf yellowing | Causes | PMC9190982 |
