Colwellia psychrerythraea str. ND2E

Gram-negativeRodMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia psychrerythraea str. ND2E is a Gram-negative bacterium characterized by its rod shape and singular cell arrangement, which reflects its adaptation to specialized habitats. This psychrophilic organism thrives optimally at a temperature of 8.0°C, indicating a preference for cold environments, typical of polar or deep-sea ecosystems. As a facultatively anaerobe, Colwellia psychrerythraea str. ND2E possesses metabolic flexibility that allows it to utilize both aerobic and anaerobic respiration, thereby enhancing its survival in varying oxygen conditions. The organism's cold-adapted physiology and metabolic versatility suggest it plays a significant role in biogeochemical cycles in its native environments, potentially influencing nutrient cycling and organic matter decomposition in cold marine ecosystems. Its ability to thrive at low temperatures while accommodating fluctuations in oxygen availability positions Colwellia psychrerythraea str. ND2E as a key player in the microbial community dynamics of specialized habitats, where it may interact with other microorganisms and contribute to the overall ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia psychrerythraea
StrainND2E

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Colwellia psychrerythraea str. ND2E
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperature8
Temperature rangePsychrophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia psychrerythraea strain ND2E ctg9, whole genome shotgun

Gene Summary

Adenine Count

1593643 bp

Thymine Count

1597989 bp

Guanine Count

985145 bp

Cytosine Count

978072 bp

Genome Length

5154850 bp

Protein-coding Genes

4323 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative dna-binding proteinND2E_3051Not AvailablePositive2370670 - 237116718504.1
Hypothetical proteinND2E_3052Not AvailablePositive2371171 - 237291966397.3
Putative portal proteinND2E_3053Not AvailablePositive2372916 - 237436753819.1
AttrNot AvailableNot AvailablePositive2373243 - 2373254Not Available
Head morphogenesis proteinND2E_3054Not AvailablePositive2374470 - 237572347674.4
AttlNot AvailableNot AvailablePositive5123836 - 5123849Not Available
Lysr family transcriptional regulatorND2E_0975Not AvailablePositive5125872 - 512675934066.4
Putative ci repressorND2E_0976Not AvailableNegative5126981 - 512773328067.4
hypothetical proteinND2E_0977Not AvailablePositive5127956 - 51281868437.23
IntegraseND2E_0978Not AvailablePositive5128179 - 513041683715.2

Displaying genes 41 – 50 of 4473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

22 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0003841N-[(R)-4-phosphopantothenoyl]-L-cysteineC12H20N2O9PSChemical structure of N-[(R)-4-phosphopantothenoyl]-L-cysteineNot available
Average399.33Da
Monoisotopic399.064359144Da

Displaying 1–10 of 22 metabolites

Health Effects

No health effects information available for this bacterium.