Capnocytophaga cynodegmi str. Ccy74

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga cynodegmi str. Ccy74 is a nonsporulating, Gram-negative bacterium that primarily resides in the intestinal microflora of animals. This microbe exhibits chemoheterotrophic metabolism, deriving its energy and carbon from organic compounds present in its environment. It thrives optimally at a temperature of 37.0°C, which aligns with the physiological conditions typically found in the intestines of warm-blooded animals. As a member of the intestinal microbiota, Capnocytophaga cynodegmi str. Ccy74 may play a role in the complex interactions within the gut ecosystem, contributing to the overall health and homeostasis of its host. Its presence in the gut highlights the importance of such bacteria in the digestion of nutrients and the maintenance of gut health. Further studies may elucidate the specific metabolic pathways utilized by this strain, potentially revealing its contributions to nutrient cycling and its interactions with other microbial species in the intestinal environment. Understanding these dynamics can provide insights into the broader ecological roles of gut-residing bacteria and their impact on host physiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga cynodegmi
StrainCcy74

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Canis lupus familiaris
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Capnocytophaga cynodegmi genome assembly Ccyn74.1, contig

Gene Summary

Adenine Count

885661 bp

Thymine Count

884533 bp

Guanine Count

463942 bp

Cytosine Count

464082 bp

Genome Length

2698218 bp

Protein-coding Genes

2452 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylaseCCYN74_100034Not AvailableNegative273486 - 27451438274.6
triosephosphate isomeraseCCYN74_100035Not AvailableNegative274594 - 27534327147.6
170 kda melanoma membrane-bound gelatinaseCCYN74_100036Not AvailablePositive275578 - 27780385854.5
conserved hypothetical proteinCCYN74_100037Not AvailablePositive278177 - 27877023503.3
conserved hypothetical proteinCCYN74_100038Not AvailablePositive279107 - 27977225465.5
amino acid/peptide transporter (peptide:h+ symporter)CCYN74_100039Not AvailablePositive279895 - 28155661703.4
uncharacterized transporter yclfCCYN74_100040Not AvailablePositive281649 - 28355670698.5
exported hypothetical proteinCCYN74_100041Not AvailableNegative283885 - 28612578884.0
beta-n-acetylhexosaminidaseCCYN74_100042Not AvailablePositive286516 - 28884988102.8
pyrazinamidase/nicotinamidaseCCYN74_100043Not AvailablePositive288934 - 28951821849.9

Displaying genes 241 – 250 of 2496 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014074LevanC18H32O16Chemical structure of Levan9013-95-0
Average504.4371Da
Monoisotopic504.169034976Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0014084GlycogenC24H42O21Chemical structure of Glycogen9005-79-2
Average666.5777Da
Monoisotopic666.221858406Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014086Amylose(C12H20O11)nC2H6Chemical structure of Amylose9005-82-7Not available
BASm0014087DextrinC18H32O16Chemical structure of Dextrin9004-53-9
Average504.4371Da
Monoisotopic504.169034976Da

Displaying 1–7 of 7 metabolites

Health Effects

Health ConditionRelationReference
Local wound infectionsCausesPMC10269634
SepsisCausesPMC10269634
CellulitisCausesPMC10269634
Skin and soft tissue infectionsCausesPMC11218291
SepsisCausesPMC4780008
MeningitisCausesPMC4780008
EndocarditisCausesPMC4780008
Eye- or wound infectionsCausesPMC4780008
Rare, mild local infectionsCausesPMC6030092

Displaying health effects 1 – 9 of 9 in total