Yersinia aleksiciae

Gram-negativerodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia aleksiciae is a Gram-negative, rod-shaped bacterium characterized as a nonsporulating, aerobic chemoheterotroph. This microbe thrives optimally at a temperature of 30.0°C and is predominantly found within the intestinal microflora of animals. Its aerobic nature indicates a reliance on oxygen for metabolic processes, which aligns with its ecological niche in the oxygen-rich environment of the intestine. As a member of the intestinal microbiota, Y. aleksiciae may play a role in the complex interplay of microbial communities that contribute to host digestion and overall health. The presence of this bacterium in animal intestines suggests its potential involvement in nutrient cycling and the maintenance of gut homeostasis. Furthermore, its adaptation to a specific temperature range indicates a level of specialization that may reflect the thermal conditions of its habitat. This specialization also prompts consideration of Y. aleksiciae's interactions with other gut inhabitants and its responses to environmental changes that could affect its ecological role. Understanding these dynamics may provide insights into the broader implications of Y. aleksiciae within gastrointestinal microbiomes and its potential contributions to host physiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia aleksiciae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia aleksiciae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Yersinia aleksiciae strain IP27925 genome assembly, contig:

Gene Summary

Adenine Count

1145460 bp

Thymine Count

1154891 bp

Guanine Count

1098970 bp

Cytosine Count

1091201 bp

Genome Length

4490614 bp

Protein-coding Genes

3962 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide transport periplasmic protein lptaERS008460_01680Not AvailableNegative1819695 - 182024019753.8
protein yrbk clustered with lipopolysaccharide transportersERS008460_01681Not AvailableNegative1820224 - 182078720966.9
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseERS008460_01682Not AvailableNegative1820784 - 182134720208.5
d-arabinose 5-phosphate isomeraseERS008460_01683Not AvailableNegative1821361 - 182234735025.9
putative calcium/sodium:proton antiporterERS008460_01684Not AvailableNegative1822378 - 182335234164.3
putative abc transporter atp-binding protein yrbfERS008460_01685Not AvailablePositive1823625 - 182443429545.0
abc transporter%2c permease component yrbeERS008460_01686Not AvailablePositive1824498 - 182528027841.8
abc transporter%2c periplasmic component yrbdERS008460_01687Not AvailablePositive1825285 - 182585119729.7
abc transporter%2c auxiliary component yrbcERS008460_01688Not AvailablePositive1825864 - 182649023572.4
putative anti-sigma b factor antagonistERS008460_01689Not AvailablePositive1826490 - 182683412793.3

Displaying genes 1781 – 1790 of 4149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.