Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Coturnix japonica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable periplasmic serine endoprotease degp-like precursor | NCTC11190_00810 | Not Available | Positive | 1011068 - 1012585 | 53903.0 |
| rna polymerase sigma factor rpod | NCTC11190_00811 | Not Available | Positive | 1012768 - 1013628 | 32632.9 |
| uncharacterised protein | NCTC11190_00812 | Not Available | Negative | 1013902 - 1014693 | 28703.9 |
| beta-hexosaminidase | NCTC11190_00813 | Not Available | Negative | 1015208 - 1016368 | 42158.6 |
| alanine--trna ligase | NCTC11190_00814 | Not Available | Negative | 1016373 - 1016813 | 16335.5 |
| prolyl endopeptidase | NCTC11190_00815 | Not Available | Negative | 1017077 - 1019215 | 79305.1 |
| uncharacterised protein | NCTC11190_00816 | Not Available | Positive | 1019366 - 1019482 | 4513.72 |
| 37-kd nucleoid-associated bacterial protein | NCTC11190_00817 | Not Available | Positive | 1019509 - 1020582 | 41069.1 |
| uncharacterized n-acetyltransferase yvbk | NCTC11190_00818 | Not Available | Positive | 1020586 - 1021044 | 17101.3 |
| protease3 | NCTC11190_00819 | Not Available | Positive | 1021155 - 1022411 | 47028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.