Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane cobalamin receptor proteinNCTC11190_00016Not AvailableNegative19431 - 23000129375.0
cytosol non-specific dipeptidaseNCTC11190_00017Not AvailableNegative23298 - 2475853260.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseNCTC11190_00018Not AvailablePositive25145 - 2562717509.3
glyceraldehyde-3-phosphate dehydrogenase aNCTC11190_00019Not AvailableNegative26138 - 2714236085.6
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseNCTC11190_00020Not AvailableNegative27371 - 2831835963.0
uncharacterised proteinNCTC11190_00021Not AvailableNegative28329 - 2889220594.7
putative translation factor (sua5)NCTC11190_00022Not AvailableNegative28899 - 2951322321.9
putative aminodeoxychorismate lyaseNCTC11190_00024Not AvailablePositive29778 - 3087241262.4
transglutaminase-like superfamilyNCTC11190_00025Not AvailableNegative31470 - 3268445004.3
protein of uncharacterised function (duf1573)NCTC11190_00026Not AvailablePositive32907 - 3327213419.5

Displaying genes 51 – 60 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.