Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
macrolide-specific efflux protein maca precursorNCTC11190_00510Not AvailablePositive658881 - 66006540491.6
cation efflux system protein czcaNCTC11190_00511Not AvailablePositive660407 - 663520111832.0
type i secretion outer membrane protein, tolc familyNCTC11190_00512Not AvailablePositive663762 - 66493442493.3
octaprenyl-diphosphate synthaseNCTC11190_00513Not AvailableNegative665024 - 66602537186.6
d-tyrosyl-trna(tyr) deacylaseNCTC11190_00514Not AvailableNegative666035 - 66648716035.2
n-acetyl-beta-hexosaminidaseNCTC11190_00515Not AvailableNegative666536 - 66753736500.6
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseNCTC11190_00516Not AvailablePositive667594 - 66832527403.5
farnesyl diphosphate synthaseNCTC11190_00517Not AvailablePositive668382 - 66935935538.1
phosphomethylpyrimidine synthaseNCTC11190_00518Not AvailablePositive669365 - 67090957412.8
6-pyruvoyl tetrahydropterin synthase/qued family proteinNCTC11190_00519Not AvailablePositive671394 - 67184917264.6

Displaying genes 541 – 550 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.