Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Coturnix japonica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase t | NCTC11190_00409 | Not Available | Positive | 527306 - 528538 | 45257.8 |
| uncharacterised protein | NCTC11190_00410 | Not Available | Positive | 528748 - 528906 | 6012.07 |
| uncharacterised protein | NCTC11190_00411 | Not Available | Negative | 529583 - 529837 | 8726.78 |
| glucokinase | NCTC11190_00412 | Not Available | Positive | 530064 - 531038 | 35057.3 |
| uncharacterised protein | NCTC11190_00413 | Not Available | Positive | 531170 - 531889 | 26530.0 |
| lipoteichoic acid synthase 1 | NCTC11190_00414 | Not Available | Negative | 531696 - 533681 | 75840.0 |
| inner membrane transport permease ybhr | NCTC11190_00415 | Not Available | Positive | 533948 - 535159 | 44260.1 |
| oligopeptide transporter, opt family | NCTC11190_00416 | Not Available | Positive | 535289 - 537298 | 70238.3 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | NCTC11190_00417 | Not Available | Positive | 538630 - 539061 | 16565.6 |
| putative periplasminc binding protein (duf178) | NCTC11190_00418 | Not Available | Positive | 539115 - 540002 | 31969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.