Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane cobalamin translocatorNCTC11190_00317Not AvailableNegative394381 - 39675387835.9
predicted o-linked n-acetylglucosamine transferase, spindly familyNCTC11190_00318Not AvailableNegative396940 - 39789634058.7
pp_00303NCTC11190_00319Not AvailableNegative398026 - 398451Not Available
sensor protein degsNCTC11190_00320Not AvailableNegative398881 - 39984635999.0
uncharacterized protein involved in outer membrane biogenesisNCTC11190_00321Not AvailablePositive399986 - 403510128593.0
Trna-valNot AvailableNot AvailablePositive403636 - 403711Not Available
uncharacterised proteinNCTC11190_00323Not AvailablePositive403873 - 40418411465.5
dna-invertase hinNCTC11190_00324Not AvailablePositive404314 - 40492223612.0
taqi-like c-terminal specificity domainNCTC11190_00325Not AvailablePositive404934 - 40581834552.5
type iis restriction enzyme eco57iNCTC11190_00326Not AvailableNegative405815 - 409174130443.0

Displaying genes 351 – 360 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.