Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane transport permease ybhsNCTC11190_00307Not AvailableNegative381721 - 38289341715.9
putative efflux pump membrane fusion proteinNCTC11190_00308Not AvailableNegative383600 - 38458035411.1
cation efflux system protein czccNCTC11190_00309Not AvailableNegative384599 - 38606553064.9
uncharacterised proteinNCTC11190_00310Not AvailablePositive386242 - 38675419465.2
methionine--trna ligaseNCTC11190_00311Not AvailablePositive387153 - 38925278010.0
colicin v production proteinNCTC11190_00312Not AvailableNegative389150 - 38976121226.4
membrane protein of uncharacterised function (duf340)NCTC11190_00313Not AvailableNegative389902 - 39084932607.0
Trna-argNot AvailableNot AvailablePositive390914 - 390985Not Available
cell division inhibitor mindNCTC11190_00315Not AvailableNegative391259 - 39234138229.4
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseNCTC11190_00316Not AvailableNegative392460 - 39426866841.0

Displaying genes 341 – 350 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.