Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (guanosine(18)-2'-o)-methyltransferaseNCTC11190_02358Not AvailableNegative2846103 - 284695131991.9
putative ribosome biogenesis gtpase rsgaNCTC11190_02359Not AvailableNegative2846920 - 284787334984.7
l-rhamnose operon regulatory protein rhasNCTC11190_02360Not AvailableNegative2847987 - 284885633303.0
30s ribosomal protein s6NCTC11190_02361Not AvailablePositive2849168 - 284951213309.8
30s ribosomal protein s18NCTC11190_02362Not AvailablePositive2849515 - 284978410327.9
50s ribosomal protein l9NCTC11190_02363Not AvailablePositive2849808 - 285027516276.6
na(+)/drug antiporterNCTC11190_02364Not AvailablePositive2851027 - 285237349023.6
glutamate--trna ligaseNCTC11190_02365Not AvailableNegative2852775 - 285431058219.4
putative electron transport protein yccmNCTC11190_02366Not AvailablePositive2854720 - 285594045640.2
translation initiation factor if-2NCTC11190_02367Not AvailableNegative2856007 - 2858814100351.0

Displaying genes 2351 – 2360 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.