Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
calcineurin-like phosphoesterase superfamily domainNCTC11190_02027Not AvailablePositive2412103 - 241307136657.5
penicillin-binding protein eNCTC11190_02028Not AvailablePositive2413100 - 241456954931.0
hydrolase of x-linked nucleoside diphosphate n terminalNCTC11190_02029Not AvailableNegative2415039 - 241566823613.9
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseNCTC11190_02030Not AvailableNegative2415915 - 241752859152.7
autoinducer 2-binding protein lsrb precursorNCTC11190_02031Not AvailableNegative2418129 - 241906131788.8
alanine--trna ligaseNCTC11190_02032Not AvailableNegative2419066 - 242169397365.1
murein hydrolase activator nlpd precursorNCTC11190_02033Not AvailablePositive2422100 - 242307437171.7
murein hydrolase activator nlpd precursorNCTC11190_02034Not AvailablePositive2423067 - 242401135940.8
atp-dependent helicase/nuclease subunit aNCTC11190_02035Not AvailableNegative2424473 - 2427637117686.0
tonb-dependent receptorNCTC11190_02036Not AvailablePositive2427933 - 243042891813.9

Displaying genes 2021 – 2030 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.