Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Coturnix japonica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | NCTC11190_01887 | Not Available | Negative | 2236393 - 2237250 | 31100.0 |
| prolyl tri/tetrapeptidyl aminopeptidase precursor | NCTC11190_01888 | Not Available | Negative | 2237375 - 2238670 | 48933.9 |
| d-inositol-3-phosphate glycosyltransferase | NCTC11190_01889 | Not Available | Negative | 2238681 - 2239826 | 42933.6 |
| formate--tetrahydrofolate ligase | NCTC11190_01890 | Not Available | Positive | 2239931 - 2241601 | 59535.2 |
| calcineurin-like phosphoesterase | NCTC11190_01891 | Not Available | Positive | 2241729 - 2242805 | 40705.4 |
| uncharacterised protein | NCTC11190_01892 | Not Available | Positive | 2242811 - 2243401 | 21621.8 |
| stage ii sporulation protein e | NCTC11190_01893 | Not Available | Positive | 2243398 - 2244582 | 43053.9 |
| transglycosylase associated protein | NCTC11190_01894 | Not Available | Negative | 2245072 - 2245317 | 8546.11 |
| pyruvate kinase | NCTC11190_01895 | Not Available | Negative | 2245753 - 2247186 | 52852.1 |
| 3-dehydroquinate dehydratase | NCTC11190_01896 | Not Available | Negative | 2247706 - 2248134 | 15560.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.