Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(r)-stereoselective amidaseNCTC11190_01534Not AvailablePositive1829870 - 183067330448.5
sulfite exporter taue/safeNCTC11190_01535Not AvailablePositive1830680 - 183145927819.5
membrane-bound lytic murein transglycosylase d precursorNCTC11190_01536Not AvailablePositive1831437 - 183240836706.9
excinuclease abc subunit aNCTC11190_01537Not AvailablePositive1832398 - 1835286106720.0
domain of uncharacterised function (duf349)NCTC11190_01538Not AvailablePositive1835393 - 183741177497.7
ctp synthaseNCTC11190_01539Not AvailablePositive1837421 - 183904660106.4
oxa1ecNCTC11190_01540Not AvailablePositive1839057 - 184096472543.0
2-oxoglutarate ferredoxin oxidoreductase subunit betaNCTC11190_01541Not AvailableNegative1841329 - 184234837672.5
2-oxoglutarate ferredoxin oxidoreductase subunit alphaNCTC11190_01542Not AvailableNegative1842359 - 184419766156.7
uncharacterised proteinNCTC11190_01543Not AvailableNegative1844176 - 18443827880.42

Displaying genes 1531 – 1540 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.