Rikenella microfusus

anaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Rikenella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusRikenella
SpeciesRikenella microfusus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Coturnix japonica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rikenella microfusus strain NCTC11190 genome assembly, contig:

Gene Summary

Adenine Count

638140 bp

Thymine Count

632026 bp

Guanine Count

835063 bp

Cytosine Count

840640 bp

Genome Length

2945869 bp

Protein-coding Genes

2363 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
septum formation protein mafNCTC11190_01454Not AvailableNegative1744948 - 174555322334.8
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)NCTC11190_01455Not AvailableNegative1745567 - 174620224128.2
lipid-a-disaccharide synthaseNCTC11190_01456Not AvailableNegative1746399 - 174755643586.8
trna (guanine-n(1)-)-methyltransferaseNCTC11190_01457Not AvailableNegative1747563 - 174824325649.7
hydroxyacylglutathione hydrolaseNCTC11190_01458Not AvailableNegative1748233 - 174891924907.8
23s rrna (uracil-c(5))-methyltransferase rlmcdNCTC11190_01459Not AvailablePositive1749004 - 175041353031.5
trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmcNCTC11190_01460Not AvailablePositive1750434 - 175109024306.2
cytidine deaminaseNCTC11190_01461Not AvailablePositive1751102 - 175150614680.6
maltose o-acetyltransferaseNCTC11190_01462Not AvailablePositive1751593 - 175215320584.7
trna pseudouridine synthase cNCTC11190_01463Not AvailableNegative1752150 - 175286327046.6

Displaying genes 1451 – 1460 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.